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1.
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Analytical Techniques & Applications of Metabolomics in Systems Medicine and Systems Biotechnology Villas-Boas, Silas G; The University of Auckland
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2.
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Meeting report: The seventh conference of the Hellenic Society for Computational Biology and Bioinformatics Hamodrakas, Stavros J; University of Athens - Iliopoulos, Ioannis; University of Crete - Ouzounis, Christos A; Centre for Research & Technology Hellas AND Donelly Centre for Cellular & Biomolecular Research, University of Toronto - Bagos, Pantelis G; University of Central Greece - Promponas, Vasilis J; University of Cyprus
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3.
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Structure-based Methods for Computational Protein Functional Site Prediction KC, Dukka B; North Carolina A&T State University
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4.
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Metabolomics in the identification of biomarkers of dietary intake O’Gorman, Aoife - Gibbons, Helena - Brennan, Lorraine
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5.
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The Role of INDY in Metabolic Regulation Willmes, Diana M; Charité University School of Medicine Berlin - Birkenfeld, Andreas L; Charité University School of Medicine Berlin
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6.
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Conformational Sampling in Template-Free Protein Loop Structure Modeling: An Overview Li, Yaohang; Old Dominion University
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7.
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Molecular Dynamics Computer Simulations of Multidrug RND Efflux Pumps Ruggerone, Paolo; University of Cagliari - Vargiu, Attilio V; University of Cagliari - Collu, Francesca; University of Bern - Fischer, Nadine; University of Bonn - Kandt, Christian; University of Bonn
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8.
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Reconstruction of SAXS Profiles from Protein Structures Putnam, Daniel K; Vanderbilt University - Lowe Jr, Edward W; Vanderbilt University - Meiler, Jens; Vanderbilt University
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9.
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The biological microprocessor, or how to build a computer with biological parts Moe-Behrens, Gerd HG; Leukippos Institute for Synthetic Biology
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10.
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Comparison and Enumeration of Chemical Graphs Akutsu, Tatsuya; Kyoto University - Nagamochi, Hiroshi; Kyoto University
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11.
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Methods for Similarity-based Virtual Screening Kristensen, Thomas Greve; Bioinformatics Research Centre, Aarhus University - Nielsen, Jesper; Bioinformatics Research Centre, Aarhus University - Pedersen, Christian Nørgaard Storm; Bioinformatics Research Centre, Aarhus University
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12.
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Importance of understanding the main metabolic regulation in response to the specific pathway mutation for metabolic engineering of Escherichia coli Matsuoka, Yu - Shimizu, Kazuyuki; Kyushu Institute of Technology
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13.
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The Innovative Medicines Initiative: a Public Private Partnership Model to Foster Drug Discovery Vaudano, Elisabetta; Innovative Medicines Initiative
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14.
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Untargeted metabolomics: an emerging approach to determine the composition of herbal products Commisso, Mauro; University of Verona - Strazzer, Pamela - Toffali, Ketti - Stocchero, Matteo - Guzzo, Flavia
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15.
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Frequency of dipeptides and antidipeptides Carugo, Oliviero; University of Pavia
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16.
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Error Analysis and Propagation in Metabolomics Data Analysis Moseley, Hunter N B; University of Louisville
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17.
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Spectral Deconvolution for Gas Chromatography Mass Spectrometry-Based Metabolomics: Current Status and Future Perspectives Du, Xiuxia; University of North Carolina at Charlotte - Zeisel, Steven H; University of North Carolina at Chapel Hill
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18.
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From plant genomes to protein families: computational tools Martinez, Manuel; Universidad Politecnica de Madrid
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19.
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Integrated LC-MS/MS system for plant metabolomics Sawada, Yuji; RIKEN Plant Science Center - Hirai, Masami Yokota
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20.
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The role of Lipoxin A4 in Cystic Fibrosis Lung Disease Urbach, Valérie; Institut National de la Santé et de la Recherche Médicale - Higgins, Gerard; The National Children's Research Centre, Dublin - Buchanan, Paul; The National Children's Research Centre, Dublin - Ringholz, Fiona; The National Children's Research Centre
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21.
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Small world network strategies for studying protein structures and binding Taylor, Neil R; Desert Scientific Software
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22.
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Therapeutic application of nanotechnology in cardiovascular and pulmonary regeneration Chun, Young Wook; Vanderbilt University - Crowder, Spencer W - Mehl, Steven C - Wang, Xingtong - Bae, Hojae - Sung, Hak-joon
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23.
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Automated detection of structural alerts (chemical fragments) in (eco)toxicology Lepailleur, Alban; CERMN, University of Caen Basse Normandie France - Poezevara, Guillaume - Bureau, Ronan; CERMN, University of Caen Basse Normandie France
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24.
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Targeted, LCMS-based Metabolomics for Quantitative Measurement of NAD+ Metabolites Trammell, Samuel AJ; University of Iowa - Brenner, Charles; University of Iowa
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25.
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The role of mitochondria in the development and progression of lung cancer Roberts, Emily R; Colorado Mesa University - Thomas, Kelly Jean; Colorado Mesa University
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26.
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Fusing similarity rankings in ligand-based virtual screening Willett, Peter; University of Sheffield
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27.
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Statistical methods for the analysis of high-throughput metabolomics data Bartel, Jörg - Krumsiek, Jan - Theis, Fabian J.
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28.
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Membrane Packing Problems: A short Review on computational Membrane Modeling Methods and Tools Sommer, Björn; Bielefeld University
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29.
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MD simulation studies to investigate iso-energetic conformational behaviour of modified nucleosides m2G and m22G present in tRNA Bavi, Rohit S - Sambhare, Susmit B - Sonawane, Kailas D; Structural Bioinformatics Unit, Department of Biochemistry, Shivaji University, Kolhapur 416 004, Maharashtra (M.S.), India.
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30.
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A method to predict edge strands in beta-sheets from protein sequences Guilloux, Antonin - Caudron, Bernard - Jestin, Jean-Luc
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31.
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Progression of 'OMICS' methodologies for understanding the pathogenicity of Corynebacterium pseudotuberculosis: the Brazilian experience Dorella, Fernanda A; UFMG - Gala-Garcia, Alfonso; UFMG - Pinto, Anne C; UFMG - Sarrouh, Boutros; UFMG - Antunes, Camila A; UFMG - Ribeiro, Dayana; UFMG - Aburjaile, Flávia; UFMG - Fiaux, Karina K; UFMG - Guimarães, Luis C; UFMG - Seyffert, Nubia; UFMG - El-Aouar, Rachid A; UFMG - Silva, Renata; UFMG - Hassan, Syed S; UFMG - Casto, Thiago LP; UFMG - Marques, Wanderson S; UFMG - Ramos, Rommel; UFPA - Carneiro, Adriana; UFPA - de Sá, Pablo; UFPA - Miyoshi, Anderson; UFMG - Azevedo, Vasco; UFMG - Silva, Artur; UFPA
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32.
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A Rough Guide to Metabolite Identification Using High Resolution Liquid Chromatography Mass Spectrometry in Metabolomic Profiling in Metazoans Watson, David G; Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde, 161, Cathedral Street, Glasgow G4 0RE
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33.
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Bile acid binding protein: a versatile host of small hydrophobic ligands for applications in the fields of MRI contrast agents and bio-nanomaterials Pagano, Katiuscia; Istituto per lo Studio delle Macromolecole (ISMAC), Consiglio Nazionale delle Ricerche, Via Bassini, 15 20133, Milano, ITALY - Tomaselli, Simona; Istituto per lo Studio delle Macromolecole (ISMAC), Consiglio Nazionale delle Ricerche, Via Bassini, 15 20133, Milano, ITALY - Zanzoni, Serena; Dipartimento di Biotecnologie, Università degli Studi di Verona, Strada Le Grazie 15, 37134, Verona, Italy - Assfalg, Michael; Dipartimento di Biotecnologie, Università degli Studi di Verona, Strada Le Grazie 15, 37134, Verona, Italy - Molinari, Henriette; Istituto per lo Studio delle Macromolecole (ISMAC), Consiglio Nazionale delle Ricerche, Via Bassini, 15 20133, Milano, ITALY - Ragona, Laura; Istituto per lo Studio delle Macromolecole (ISMAC), Consiglio Nazionale delle Ricerche, Via Bassini, 15 20133, Milano, ITALY
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34.
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A network-based approach for predicting Hsp27 knock-out targets in mouse skeletal muscles Kammoun, Malek - Picard, Brigitte - Henry-Berger, Joëlle - Cassar-Malek, Isabelle
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35.
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The essential biology of the endoplasmic reticulum stress response for structural and computational biologists Wakabayashi, Sadao - Yoshida, Hiderou; Department of Biochemistry and Molecular Biology Graduate School of Life Science University of Hyogo
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36.
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A frequency-based linguistic approach to protein decoding and design: Simple concepts, diverse applications, and the SCS Package Motomura, Kenta; University of the Ryukyus - Nakamura, Morikazu; University of the Ryukyus - Otaki, Joji M.; University of the Ryukyus
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37.
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Probing Genome Maintenance Functions of human RECQ1 Sami, Furqan - Sharma, Sudha
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38.
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Measuring the shapes of macromolecules – and why it matters Li, Jie; University of California, Davis - Mach, Paul; University of California, Davis - Koehl, Patrice; University of California, Davis
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39.
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Searching for Electrical Properties, Phenomena and Mechanisms in the Construction and Function of Chromosomes Kanev, Ivan; Human Genetics Laboratories, Munroe-Meyer Institute for Genetics and Rehabilitation, University of Nebraska Medical Center - Mei, Wai-Ning - Mizuno, Akira - DeHaai, Kristi - Sanmann, Jennifer - Hess, Michelle - Starr, Lois - Grove, Jennifer - Dave, Bhavana - Sanger, Warren
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40.
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Bioprocess systems engineering: transferring traditional process engineering principles to industrial biotechnology Koutinas, Michalis; Cyprus University of Technology - Kiparissides, Alexandros; Imperial College London - Pistikopoulos, Efstratios N; Imperial College London - Mantalaris, Athanasios; Imperial College London
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41.
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Methods for recombinant expression and functional characterization of human cannabinoid receptor CB2 Yeliseev, Alexei A; National Institutes of Health
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42.
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The Cytotoxic Effects of Low Intensity Visible and Infrared Light on Human Breast Cancer (MCF7) cells Peidaee, P; Royal Melbourne Institute of Technology - Almansour, N - Shukla, R - Pirogova, E
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43.
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Biomarker Identification in Breast Cancer: Beta-Adrenergic Receptor Signaling and Pathways to Therapeutic Response Kafetzopoulou, Liana E.; John van Geest Cancer Research - Boocock, David J. - Dhondalay, Gopal Krishna R. - Powe, Desmond G. - Ball, Graham R.
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44.
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Recent advances in functional region prediction by using structural and evolutionary information – Remaining problems and future extensions Nemoto, Wataru; Division of Life Science and Engineering, School of Science and Engineering, Tokyo Denki University. - Saito, Akira - Oikawa, Hayato
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45.
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Of mice and men: Dissecting the interaction between Listeria monocytogenes Internalin A and E-cadherin Genheden, Samuel; University of Southampton - Eriksson, Leif A; University of Gothenburg
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46.
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Chemical Structure Identification in Metabolomics: Computational Modeling of Experimental Features Menikarachchi, Lochana C; Department of Pharmaceutical Sciences, University of Connecticut, 69 N Eagleville Rd, Storrs, CT 06269 - Hamdalla, Mai A; Department of Computer Science & Engineering, University of Connecticut, 371 Fairfield Road, Unit 2155 Storrs, CT 06269 - Hill, Dennis W; Department of Pharmaceutical Sciences, University of Connecticut, 69 N Eagleville Rd, Storrs, CT 06269 - Grant, David F; Department of Pharmaceutical Sciences, University of Connecticut, 69 N Eagleville Rd, Storrs, CT 06269
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47.
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Combinatorial approaches for inverse metabolic engineering applications Skretas, Georgios; National Hellenic Research Foundation - Kolisis, Fragiskos N; National Technical University of Athens
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48.
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Inverted Topologies in Membrane Proteins: A Mini-Review Duran, Amanda M; Vanderbilt University - Meiler, Jens
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49.
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LC-MS metabolomics from study design to data-analysis – using a versatile pathogen as a test case Berg, Maya; Institute of Tropical Medicine Antwerp - Vanaerschot, Manu; Institute of Tropical Medicine Antwerp - Jankevics, Andris; University of Glasgow and University of Groningen - Cuypers, Bart; Institute of Tropical Medicine Antwerp - Breitling, Rainer; University of Manchester - Dujardin, Jean-Claude; Institute of Tropical Medicine Antwerp
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50.
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Changes in the genome-wide localization pattern of Sir3 in Saccharomyces cerevisiae during different growth stages Tung, Shu-Yun; Academia Sinica - Lee, Kuan-Wei; National Health Research Institutes - Hong, Jia-Yang; National Health Research Institutes - Lee, Sue-Ping; Academia Sinica - Shen, Hsiao-Hsuian; National Health Research Institutes - Liou, Gunn-Guang; National Health Research Institutes
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51.
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Engineering Microbes for Plant Polyketide Biosynthesis Lussier, Francois-Xavier - Colatriano, David - Wiltshire, Zach - Page, Jonathan E. - Martin, Vincent J. J.
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52.
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Robustness in experimental design: A study on the reliability of selection approaches Brandmaier, Stefan - Tetko, Igor V
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53.
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Autophagy in Plasmodium, a multifunctional pathway? Hain, Adelaide U.P.; Johns Hopkins University Bloomberg School of Public Health Department of Biochemistry & Molecular Biology Johns Hopkins Malaria Research Institute - Bosch, Jürgen; Johns Hopkins University Bloomberg School of Public Health Department of Biochemistry & Molecular Biology Johns Hopkins Malaria Research Institute
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54.
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LC-MS-based Metabolomics of Xenobiotic-induced Toxicities Chen, Chi; University of Minnesota - Kim, Sangyub
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55.
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Quantitative HSQC Analyses of Lignin: A Practical Comparison Sette, Marco; Università degli Studi di Roma 'Tor Vergata' Facoltà di Scienze Matematiche, Fisiche e Naturali Dipartimento di Scienze e Tecnologie Chimiche - Lange, Heiko; Università degli Studi di Roma 'Tor Vergata' Facoltà di Scienze Matematiche, Fisiche e Naturali Dipartimento di Scienze e Tecnologie Chimiche - Crestini, Claudia; Università degli Studi di Roma 'Tor Vergata' Facoltà di Scienze Matematiche, Fisiche e Naturali Dipartimento di Scienze e Tecnologie Chimiche
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56.
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Computational Tools for the Secondary Analysis of Metabolomics Experiments Booth, Sean Cameron; Department of Biological Sciences University of Calgary - Weljie, Aalim; University of Pennsylvania - Turner, Raymond Joseph; University of Calgary
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57.
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A Two-stage Peak Alignment Algorithm for Two-Dimensional Gas Chromatography Time-of-Flight Mass Spectrometry-Based Metabolomics Wang, Bing; Tongji University
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58.
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A Network View on Parkinson’s Disease Chandrasekaran, Sreedevi; Virginia Commonwealth University - Bonchev, Danail; Virginia Commonwealth University
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59.
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Multivariate linear QSPR/QSAR models: Rigorous evaluation of variable selection for PLS Varmuza, Kurt; Vienna University of Technology, Laboratory for Chemometrics - Filzmoser, Peter; Vienna University of Technology, Department of Statistics an Probability Theory - Dehmer, Matthias; UMIT - The Health and Lifesciences University, Institute for Bioinformatics and Translational Research, Hall in Tyrol
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60.
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A Sieve-Raft Hypothesis for the regulation of endothelial fenestrations Cogger, Victoria C. - Roessner, Ute - Warren, Alessandra - Fraser, Robin - Le Couteur, David G.
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61.
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Three-dimensional mapping of differential amino acids of human, murine, canine and equine TLR4/MD-2 receptor complexes conferring endotoxic activation by lipid A, antagonism by Eritoran and species-dependent activities of lipid IVa ........ Scior, Thomas; DEPARTAMENTO de FARMACIA FACULTAD DE CIENCIAS QUIMICAS BENEMERITA UNIVERSIDAD AUTONOMA DE PUEBLA, Puebla, PUE., MEXICO - Lozano-Aponte, Jorge; BENEMERITA UNIVERSIDAD AUTONOMA DE PUEBLA CIUDAD UNIVERSITARIA C.U. Laboratorio de Simulaciones moleculares computacionales, Facultad de Ciencias Quimicas, 14 SUR CON AVENIDA SAN CLAUDIO C.P. 72570 COLONIA SAN MANUEL Puebla, PUE., MEXICO - Figueroa-Vazquez, Vianihuini; Department of Hematology and Laboratory for Cellular Therapy, Instituto Maimonides Investigación Biomédica, Cordoba, Spain. - Yunes-Rojas, Julian Alexandro; Departamento de Biotecnología, Tecnológico de Monterrey, campus Puebla, México. - Zähringer, Ulrich - Alexander, Christian; Division of Immunochemistry, Research Center Borstel, Leibniz-Center for Medicine and Biosciences, Borstel,Germany.
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62.
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The albumin-binding domain as a scaffold for protein engineering Nilvebrant, Johan; Division of protein technology, KTH Royal Institute of Technology, AlbaNova University Center, SE-106 91 Stockholm, Sweden - Hober, Sophia; Division of protein technology, KTH Royal Institute of Technology, AlbaNova University Center, SE-106 91 Stockholm, Sweden
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63.
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Data Mining Methods for Omics and Knowledge of Crude Medicinal Plants toward Big Data Biology Afendi, Farit M. - Ono, Naoaki - Nakamura, Yukiko - Nakamura, Kensuke - Darusman, Latifah K. - Kibinge, Nelson - Morita, Aki Hirai - Tanaka, Ken - Horai, Hisayuki - Altaf-Ul-Amin, Md. - Kanaya, Shigehiko; Nata institute of Science and Technology
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64.
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ChromatoGate: A Tool for Detecting Base Mis-Calls in Multiple Sequence Alignments by Semi-Automatic Chromatogram Inspection Alachiotis, Nikolaos; Heidelberg Institute for Theoretical Studies (HITS gGmbH) - Vogiatzi, Emmanouella; Institute of Marine Biology and Genetics, HCMR - Pavlidis, Pavlos; Heidelberg Institute for Theoretical Studies (HITS gGmbH) - Stamatakis, Alexandros; Heidelberg Institute for Theoretical Studies (HITS gGmbH)
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65.
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Biomarker signature identification in “omics” data with multi-class outcome Lagani, Vincenzo; Institute of Computer Science, Foundation for Research and Technology – Hellas (FORTH) - Kortas, George; Department of Computer Science, University of Crete - Tsamardinos, Ioannis; Institute of Computer Science, Foundation for Research and Technology – Hellas (FORTH) Department of Computer Science, University of Crete
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66.
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Tribology of bio-inspired nanowrinkled films on ultrasoft substrates Lackner, Juergen M; JOANNEUM RESEARCH Forschungsges.m.b.H., Institute for Surface Technologies and Photonics, Functional Surfaces - Waldhauser, Wolfgang - Major, Lukasz - Teichert, Christian - Hartmann, Paul
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67.
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Study of Uremic Toxin Fluxes Across Nanofabricated Hemodialysis Membranes Using Irreversible Thermodynamics Hedayat, Assem; University of Saskatchewan - Peace, Rob - Elmoselhi, Hamdi; Saskatchewan Transplant Program, St. Paul’s Hospital, 1702, 20th Street West, Saskatoon, SK, Canada S7M 0Z9 - Shoker, Ahmed; Director, Saskatchewan Transplant Program, St. Paul’s Hospital, 1702, 20th Street West, Saskatoon, SK, Canada S7M 0Z9 Division of Nephrology, Department of Medicine, University of Saskatchewan, 103 Hospital Drive, Saskatoon, SK, Canada S7N 0W8
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68.
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Current progress in Structure-Based Rational Drug Design marks a new mindset in drug discovery Lounnas, Valère; CMBI, NCMLS Radboud University, Nijmegen Medical Centre, Geert Grooteplein 26-28, 6525 GA Nijmegen, The Netherlands - Ritschel, Tina; Computational Drug Discovery, CMBI, NCMLS, Radboud University Medical Centre, Geert Grooteplein 26-28, 6525 GA Nijmegen, The Netherlands - Kelder, Jan; c Beethovengaarde 97, 5344 CD Oss, The Netherlands - McGuire, Ross; BioAxis Research BV, Oss Life Sciences Park, Molenstraat 110, 5342 CC Oss, The Netherlands - Bywater, Robert Paul; Magdalen College, High Street, Oxford OX1 4AU, England - Foloppe, Nicolas; 51 Natal Road, Cambridge, United Kingdom
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69.
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Escherichia coli redox mutants as microbial cell factories for the synthesis of reduced biochemicals Ruiz, Jimena Alicia - de Almeida, Alejandra - Godoy, Manuel Santiago - Mezzina, Mariela Paula - Bidart, Gonzalo Nahuel - Méndez, Beatriz Silvia - Pettinari, Maria Julia - Nikel, Pablo Ivan; University of San Martin
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70.
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Biochemical and Biophysical Characterization of Recombinant Yeast Proteasome Maturation Factor Ump1 Sá-Moura, Bebiana; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre 823, 4150-180 Porto - Simões, Ana Marisa; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre 823, 4150-180 Porto - Fraga, Joana; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre 823, 4150-180 Porto - Fernandes, Humberto; Centre for Molecular and Structural Biomedicine, CBME/IBB, LA - Abreu, Isabel A.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre 823, 4150-180 Porto - Botelho, Hugo M.; Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa - Gomes, Cláudio M.; Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa - Marques, António J.; Institute for Genetics, University of Cologne, Zülpicher Str. 47, D-50674 Cologne - Dohmen, R. Jürgen; Institute for Genetics, University of Cologne, Zülpicher Str. 47, D-50674 Cologne - Ramos, Paula C.; Centre for Molecular and Structural Biomedicine, CBME/IBB, LA - Macedo-Ribeiro, Sandra; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre 823, 4150-180 Porto
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71.
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Reviewing and identifying amino acids of human, murine, canine and equine TLR4 / MD-2 receptor complexes conferring endotoxic innate immunity activation by LPS/lipid A, or antagonistic effects by Eritoran Scior, Thomas; DEPARTAMENTO de FARMACIA FACULTAD DE CIENCIAS QUIMICAS BENEMERITA UNIVERSIDAD AUTONOMA DE PUEBLA, Puebla, PUE., MEXICO - Alexander, Christian - Zaehringer, Ulrich
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72.
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Characterization of ENU-induced Mutations in Red Blood Cell Structural Proteins Kildey, Katrina; Research and Development, Australian Red Cross Blood Service, Brisbane Australia. Queensland University of Technology, Brisbane Australia. - Flower, Robert L; Research and Development, Australian Red Cross Blood Service, Brisbane Australia. Queensland University of Technology, Brisbane Australia. - Tran, Thu V; Research and Development, Australian Red Cross Blood Service, Brisbane Australia. - Tunningley, Robert; Australian Phenomics Facility, Canberra, Australia. - Harris, Jonathan; Queensland University of Technology, Brisbane Australia. - Dean, Melinda M; Research and Development, Australian Red Cross Blood Service, Brisbane Australia.
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