by Robert Honway Lee., Thesis (M.Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2002., Includes bibliographical references (p. 81-82)., This electronic version was submitted by the student author. The certified thesis is available in the Institute Archives…

Over the past several years, the explosive growth of biological data generated by new high-throughput instruments has virtually begun to drown the biological community. There is no established infrastructure to deal with these data in a consistent and successful fashion.…

This work shows how hardware transactional memory (HTM) can be implemented to support transactions of arbitrarily large size, while ensuring that small transactions run efficiently. Our implementation handles small transactions similar to Herlihy and Moss's scheme in that it holds…